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LGHM is dedicated to the application and development of computational techniques, web tools and intelligent models for the study of human genetics and complex diseases.

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Our datasets are listed below with their respective description. We are refactoring some of our tools and upgrading our servers. Please contact our IT support (lghm.suporte@gmail.com) in case you are not able to access our services.

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DeepHP

Gastric mucosa histopathology dataset for Helicobacter pylori infection diagnosis.

The DeepHP database comprises 394,926 histopathological images, of which ~111K were labeled as Helicobacter pylori positive and ~283K remained as Helicobacter pylori-negative. Our dataset evidenced high potential and application in the computational pathology field and contributes to emerging deep learning-based applications in precision medicine filling a gap in obtaining well-annotated data for deep learning applications.

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Download here.

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If you used our data, please cite us:

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DeepHP: A New Gastric Mucosa Histopathology Dataset for Helicobacter pylori Infection Diagnosis" International Journal of Molecular Sciences 23, no. 23: 14581. https://doi.org/10.3390/ijms232314581

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Wanderson Gonçalves e Gonçalves, Marcelo Henrique Paula Dos Santos, Leonardo Miranda Brito, Helber Gonzales Almeida Palheta, Fábio Manoel França Lobato, Samia Demachki, Ândrea Ribeiro-Dos-Santos, & Gilderlanio Santana de Araújo. (2023). DeepHP: A Gastric Mucosa Histopathology Image Collection for Helicobacter pylori Infection Diagnosis (Version 1) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.8117177

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Laboratório de Genética Humana e Médica
Instituto de Ciências Biológicas, Universidade Federal do Pará
Rua Augusto Corrêa, 01
Guamá
Belém – Pará, Brasil
CEP: 66075-110

Fone/Fax: (91) 3201-7843

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